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BMCBI
2008
95views more  BMCBI 2008»
13 years 9 months ago
PURE: A webserver for the prediction of domains in unassigned regions in proteins
Background: Protein domains are the structural and functional units of proteins. The ability to parse proteins into different domains is important for effective classification, un...
Chilamakuri C. S. Reddy, Khader Shameer, Bernard O...
BMCBI
2007
175views more  BMCBI 2007»
13 years 9 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
BIOINFORMATICS
2010
94views more  BIOINFORMATICS 2010»
13 years 9 months ago
Globally, unrelated protein sequences appear random
Motivation: To test whether protein folding constraints and secondary structure sequence preferences significantly reduce the space of amino acid words in proteins, we compared th...
Daniel T. Lavelle, William R. Pearson
IJCAI
2001
13 years 11 months ago
Leveraging Data About Users in General in the Learning of Individual User Models
Models of computer users that are learned on the basis of data can make use of two types of information: data about users in general and data about the current individual user. Fo...
Anthony Jameson, Frank Wittig
BMCBI
2007
160views more  BMCBI 2007»
13 years 9 months ago
Identifying protein complexes directly from high-throughput TAP data with Markov random fields
Background: Predicting protein complexes from experimental data remains a challenge due to limited resolution and stochastic errors of high-throughput methods. Current algorithms ...
Wasinee Rungsarityotin, Roland Krause, Arno Sch&ou...