46 search results - page 3 / 10 » Accelerating Protein Classification Using Suffix Trees |
AINA
2006
IEEE
13 years 11 months ago
2006
IEEE
HMMer is a widely used tool for protein sequence homology detection, as well as functional annotation of homologous protein sequences, and protein family classification. The HMMer...
CSR
2006
Springer
13 years 11 months ago
2006
Springer
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
BMCBI
2007
13 years 7 months ago
2007
Background: Correct identification of individual Hox proteins is an essential basis for their study in diverse research fields. Common methods to classify Hox proteins focus on th...
SNPD
2004
13 years 8 months ago
2004
We proposed a new approach to compare profiles when the correlations among attributes can be represented as a tree. To account for these correlations, the profile is extended with...
BMCBI
2004
13 years 7 months ago
2004
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...