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COMPLIFE
2005
Springer
14 years 2 months ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
CVPR
2006
IEEE
14 years 10 months ago
Solving Markov Random Fields using Second Order Cone Programming Relaxations
This paper presents a generic method for solving Markov random fields (MRF) by formulating the problem of MAP estimation as 0-1 quadratic programming (QP). Though in general solvi...
M. Pawan Kumar, Philip H. S. Torr, Andrew Zisserma...
BMCBI
2007
96views more  BMCBI 2007»
13 years 8 months ago
Features generated for computational splice-site prediction correspond to functional elements
Background: Accurate selection of splice sites during the splicing of precursors to messenger RNA requires both relatively well-characterized signals at the splice sites and auxil...
Rezarta Islamaj Dogan, Lise Getoor, W. John Wilbur...
KDD
2002
ACM
119views Data Mining» more  KDD 2002»
14 years 9 months ago
Evaluating classifiers' performance in a constrained environment
In this paper, we focus on methodology of finding a classifier with a minimal cost in presence of additional performance constraints. ROCCH analysis, where accuracy and cost are i...
Anna Olecka
ICDCS
2005
IEEE
14 years 2 months ago
Similarity Searching in Peer-to-Peer Databases
We consider the problem of handling similarity queries in peer-to-peer databases. Given a query for a data object, we propose an indexing and searching mechanism which returns the...
Indrajit Bhattacharya, Srinivas R. Kashyap, Sriniv...