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RECOMB
2008
Springer
14 years 10 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
RECOMB
2007
Springer
14 years 10 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
ICALP
2009
Springer
14 years 10 months ago
Annotations in Data Streams
The central goal of data stream algorithms is to process massive streams of data using sublinear storage space. Motivated by work in the database community on outsourcing database...
Amit Chakrabarti, Graham Cormode, Andrew McGregor
SIGMOD
2009
ACM
190views Database» more  SIGMOD 2009»
14 years 10 months ago
Augmented social cognition: using social web technology to enhance the ability of groups to remember, think, and reason
We are experiencing a new Social Web, where people share, communicate, commiserate, and conflict with each other. As evidenced by systems like Wikipedia, twitter, and delicious.co...
Ed H. Chi
EDBT
2004
ACM
147views Database» more  EDBT 2004»
14 years 9 months ago
Projection Pushing Revisited
The join operation, which combines tuples from multiple relations, is the most fundamental and, typically, the most expensive operation in database queries. The standard approach t...
Benjamin J. McMahan, Guoqiang Pan, Patrick Porter,...
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