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HPCA
2009
IEEE
14 years 10 months ago
Design and implementation of software-managed caches for multicores with local memory
Heterogeneous multicores, such as Cell BE processors and GPGPUs, typically do not have caches for their accelerator cores because coherence traffic, cache misses, and latencies fr...
Sangmin Seo, Jaejin Lee, Zehra Sura
BMCBI
2011
13 years 5 months ago
Simulated evolution applied to study the genetic code optimality using a model of codon reassignments
Background: As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical ge...
Jose Santos, Ángel Monteagudo
BMCBI
2005
130views more  BMCBI 2005»
13 years 10 months ago
Squid - a simple bioinformatics grid
Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
Paulo C. Carvalho, Rafael V. Glória, Antoni...
CGO
2005
IEEE
14 years 3 months ago
Optimizing Sorting with Genetic Algorithms
The growing complexity of modern processors has made the generation of highly efficient code increasingly difficult. Manual code generation is very time consuming, but it is oft...
Xiaoming Li, María Jesús Garzar&aacu...
BMCBI
2006
88views more  BMCBI 2006»
13 years 10 months ago
RiboSubstrates: a web application addressing the cleavage specificities of ribozymes in designated genomes
Background: RNA-dependent gene silencing is becoming a routine tool used in laboratories worldwide. One of the important remaining hurdles in the selection of the target sequence,...
Jean-François Lucier, Lucien Junior Bergero...