Background: Genome-Wide Association (GWA) analysis is a powerful method for identifying loci associated with complex traits and drug response. Parts of GWA analyses, especially th...
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
While general-purpose homogeneous multi-core architectures are becoming ubiquitous, there are clear indications that, for a number of important applications, a better performance/p...
Nested data-parallelism (NDP) is a declarative style for programming irregular parallel applications. NDP languages provide language features favoring the NDP style, efficient com...
Lars Bergstrom, Mike Rainey, John H. Reppy, Adam S...
In this paper, an adaptive matrix multiplication algorithm for dynamic heterogeneous environments is developed and evaluated. Unlike the state-of-the-art approaches, where load ba...