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BMCBI
2010
123views more  BMCBI 2010»
13 years 9 months ago
Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context
Background: Different microarray studies have compiled gene lists for predicting outcomes of a range of treatments and diseases. These have produced gene lists that have little ov...
Gad Abraham, Adam Kowalczyk, Sherene Loi, Izhak Ha...
BMCBI
2007
120views more  BMCBI 2007»
13 years 9 months ago
Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays
Background: Extracting biological information from high-density Affymetrix arrays is a multi-step process that begins with the accurate annotation of microarray probes. Shortfalls...
Jun Lu, Joseph C. Lee, Marc L. Salit, Margaret C. ...
EDBT
2011
ACM
199views Database» more  EDBT 2011»
13 years 25 days ago
Finding closed frequent item sets by intersecting transactions
Most known frequent item set mining algorithms work by enumerating candidate item sets and pruning infrequent candidates. An alternative method, which works by intersecting transa...
Christian Borgelt, Xiaoyuan Yang, Rubén Nog...
KDD
2003
ACM
180views Data Mining» more  KDD 2003»
14 years 9 months ago
Classifying large data sets using SVMs with hierarchical clusters
Support vector machines (SVMs) have been promising methods for classification and regression analysis because of their solid mathematical foundations which convey several salient ...
Hwanjo Yu, Jiong Yang, Jiawei Han
BMCBI
2008
95views more  BMCBI 2008»
13 years 9 months ago
Gene set analyses for interpreting microarray experiments on prokaryotic organisms
Background: Despite the widespread usage of DNA microarrays, questions remain about how best to interpret the wealth of gene-by-gene transcriptional levels that they measure. Rece...
Nathan L. Tintle, Aaron A. Best, Matthew DeJongh, ...