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» Advanced Loop Optimizations for Parallel Computers
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GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
14 years 1 months ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....
SAC
2009
ACM
14 years 3 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
TOG
2008
137views more  TOG 2008»
13 years 8 months ago
Efficient traversal of mesh edges using adjacency primitives
Processing of mesh edges lies at the core of many advanced realtime rendering techniques, ranging from shadow and silhouette computations, to motion blur and fur rendering. We pre...
Pedro V. Sander, Diego Nehab, Eden Chlamtac, Hugue...
EUROPAR
2005
Springer
14 years 1 months ago
The Periodic-Linear Model of Program Behavior Capture
Abstract. Understanding and controlling program behavior is a challenging objective for the design of advanced compilers and critical system development. In this paper, we propose ...
Philippe Clauss, Bénédicte Kenmei, J...
CONCURRENCY
1998
87views more  CONCURRENCY 1998»
13 years 8 months ago
Titanium: A High-performance Java Dialect
Titanium is a language and system for high-performance parallel scientific computing. Titanium uses Java as its base, thereby leveraging the advantages of that language and allow...
Katherine A. Yelick, Luigi Semenzato, Geoff Pike, ...