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BMCBI
2006
102views more  BMCBI 2006»
15 years 2 months ago
SNA - a toolbox for the stoichiometric analysis of metabolic networks
Background: Despite recent algorithmic and conceptual progress, the stoichiometric network analysis of large metabolic models remains a computationally challenging problem. Result...
Robert Urbanczik
130
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BMCBI
2006
159views more  BMCBI 2006»
15 years 2 months ago
EVEREST: automatic identification and classification of protein domains in all protein sequences
Background: Proteins are comprised of one or several building blocks, known as domains. Such domains can be classified into families according to their evolutionary origin. Wherea...
Elon Portugaly, Amir Harel, Nathan Linial, Michal ...
EC
2006
195views ECommerce» more  EC 2006»
15 years 2 months ago
Automated Global Structure Extraction for Effective Local Building Block Processing in XCS
Learning Classifier Systems (LCSs), such as the accuracy-based XCS, evolve distributed problem solutions represented by a population of rules. During evolution, features are speci...
Martin V. Butz, Martin Pelikan, Xavier Llorà...
133
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BMCBI
2007
247views more  BMCBI 2007»
15 years 2 months ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai
KER
2008
107views more  KER 2008»
15 years 2 months ago
Tuplespace-based computing for the Semantic Web: a survey of the state-of-the-art
Semantic technologies promise to solve many challenging problems of the present Web applications. As they achieve a feasible level of maturity, they become increasingly accepted i...
Lyndon J. B. Nixon, Elena Paslaru Bontas Simperl, ...