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ERCIMDL
2010
Springer
132views Education» more  ERCIMDL 2010»
13 years 10 months ago
A Visual Digital Library Approach for Time-Oriented Scientific Primary Data
Abstract. Digital Library support for textual and certain types of nontextual documents has significantly advanced over the last years. While Digital Library support implies many a...
Jürgen Bernard, Jan Brase, Dieter W. Fellner,...
BMCBI
2010
89views more  BMCBI 2010»
13 years 10 months ago
Detection of gene pathways with predictive power for breast cancer prognosis
Background: Prognosis is of critical interest in breast cancer research. Biomedical studies suggest that genomic measurements may have independent predictive power for prognosis. ...
Shuangge Ma, Michael R. Kosorok
BMCBI
2010
143views more  BMCBI 2010»
13 years 10 months ago
Learning gene regulatory networks from only positive and unlabeled data
Background: Recently, supervised learning methods have been exploited to reconstruct gene regulatory networks from gene expression data. The reconstruction of a network is modeled...
Luigi Cerulo, Charles Elkan, Michele Ceccarelli
BMCBI
2010
189views more  BMCBI 2010»
13 years 10 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
BMCBI
2007
100views more  BMCBI 2007»
13 years 10 months ago
PARE: A tool for comparing protein abundance and mRNA expression data
Background: Techniques for measuring protein abundance are rapidly advancing and we are now in a situation where we anticipate many protein abundance data sets will be available i...
Eric Z. Yu, Anne E. Counterman Burba, Mark Gerstei...