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NAR
2006
84views more  NAR 2006»
13 years 9 months ago
PHEPS: web-based pH-dependent Protein Electrostatics Server
PHEPS (pH-dependent Protein Electrostatics Server) is a web service for fast prediction and experiment planning support, as well as for correlation and analysis of experimentally ...
Alexander A. Kantardjiev, Boris P. Atanasov
CIE
2010
Springer
13 years 10 months ago
Computable Ordered Abelian Groups and Fields
Abstract. We present transformations of linearly ordered sets into ordered abelian groups and ordered fields. We study effective properties of the transformations. In particular, w...
Alexander G. Melnikov
DAGSTUHL
2006
13 years 11 months ago
Coxeter Lattice Paths
Supercomputing applications usually involve the repeated parallel application of discretized differential operators. Difficulties arise with higher-order discretizations their com...
Thomas J. Ashby, Anthony D. Kennedy, Stephen M. Wa...
BMCBI
2010
138views more  BMCBI 2010»
13 years 10 months ago
A model-independent approach to infer hierarchical codon substitution dynamics
Background: Codon substitution constitutes a fundamental process in molecular biology that has been studied extensively. However, prior studies rely on various assumptions, e.g. r...
Olof Görnerup, Martin Nilsson Jacobi
BMCBI
2007
265views more  BMCBI 2007»
13 years 10 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...