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BMCBI
2006
203views more  BMCBI 2006»
13 years 7 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
BMCBI
2006
374views more  BMCBI 2006»
13 years 7 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
TYPES
2000
Springer
13 years 11 months ago
A Tour with Constructive Real Numbers
Abstract. The aim of this work is to characterize constructive real numbers through a minimal axiomatization. We introduce, discuss and justify 16 constructive axioms. Then we addr...
Alberto Ciaffaglione, Pietro Di Gianantonio
ASPLOS
2008
ACM
13 years 9 months ago
Optimistic parallelism benefits from data partitioning
Recent studies of irregular applications such as finite-element mesh generators and data-clustering codes have shown that these applications have a generalized data parallelism ar...
Milind Kulkarni, Keshav Pingali, Ganesh Ramanaraya...
BMCBI
2007
123views more  BMCBI 2007»
13 years 7 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...