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BMCBI
2008
89views more  BMCBI 2008»
13 years 7 months ago
R/parallel - speeding up bioinformatics analysis with R
Background: R is the preferred tool for statistical analysis of many bioinformaticians due in part to the increasing number of freely available analytical methods. Such methods ca...
Gonzalo Vera, Ritsert C. Jansen, Remo Suppi
AAAI
2011
12 years 7 months ago
Incorporating Boosted Regression Trees into Ecological Latent Variable Models
Important ecological phenomena are often observed indirectly. Consequently, probabilistic latent variable models provide an important tool, because they can include explicit model...
Rebecca A. Hutchinson, Li-Ping Liu, Thomas G. Diet...
FPGA
2010
ACM
232views FPGA» more  FPGA 2010»
13 years 7 months ago
High-throughput bayesian computing machine with reconfigurable hardware
We use reconfigurable hardware to construct a high throughput Bayesian computing machine (BCM) capable of evaluating probabilistic networks with arbitrary DAG (directed acyclic gr...
Mingjie Lin, Ilia Lebedev, John Wawrzynek
DAC
2007
ACM
14 years 8 months ago
Implicitly Parallel Programming Models for Thousand-Core Microprocessors
This paper argues for an implicitly parallel programming model for many-core microprocessors, and provides initial technical approaches towards this goal. In an implicitly paralle...
Wen-mei W. Hwu, Shane Ryoo, Sain-Zee Ueng, John H....
BMCBI
2004
131views more  BMCBI 2004»
13 years 7 months ago
A web services choreography scenario for interoperating bioinformatics applications
Background: Very often genome-wide data analysis requires the interoperation of multiple databases and analytic tools. A large number of genome databases and bioinformatics applic...
Remko de Knikker, Youjun Guo, Jin-long Li, Albert ...