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BMCBI
2008
123views more  BMCBI 2008»
15 years 2 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra
ALMOB
2006
109views more  ALMOB 2006»
15 years 2 months ago
A novel functional module detection algorithm for protein-protein interaction networks
Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
90
Voted
NCA
2002
IEEE
15 years 2 months ago
Comparison of Algorithmic and Machine Learning Approaches for the Automatic Fitting of Gaussian Peaks
Fitting gaussian peaks to experimental data is important in many disciplines, including nuclear spectroscopy. Nonlinear least squares fitting methods have been in use for a long t...
Radwan E. Abdel-Aal
125
Voted
BMCBI
2011
14 years 9 months ago
MRCQuant- an accurate LC/MS relative isotopic quantification algorithm on TOF instruments
Background: Relative isotope abundance quantification, which can be used for peptide identification and differential peptide quantification, plays an important role in liquid chro...
William H. Haskins, Konstantinos Petritis, Jianqiu...
128
Voted
BMCBI
2008
138views more  BMCBI 2008»
15 years 2 months ago
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions
Background: Quantitative characterization of the topological characteristics of protein-protein interaction (PPI) networks can enable the elucidation of biological functional modu...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...