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BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
Evaluation of gene-expression clustering via mutual information distance measure
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Ido Priness, Oded Maimon, Irad E. Ben-Gal
BMCBI
2010
193views more  BMCBI 2010»
13 years 2 months ago
Mayday - integrative analytics for expression data
Background: DNA Microarrays have become the standard method for large scale analyses of gene expression and epigenomics. The increasing complexity and inherent noisiness of the ge...
Florian Battke, Stephan Symons, Kay Nieselt
DATAMINE
2006
89views more  DATAMINE 2006»
13 years 7 months ago
Scalable Clustering Algorithms with Balancing Constraints
Clustering methods for data-mining problems must be extremely scalable. In addition, several data mining applications demand that the clusters obtained be balanced, i.e., be of ap...
Arindam Banerjee, Joydeep Ghosh
TKDE
2012
253views Formal Methods» more  TKDE 2012»
11 years 9 months ago
Horizontal Aggregations in SQL to Prepare Data Sets for Data Mining Analysis
—Preparing a data set for analysis is generally the most time consuming task in a data mining project, requiring many complex SQL queries, joining tables and aggregating columns....
Carlos Ordonez, Zhibo Chen 0002
BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
svdPPCS: an effective singular value decomposition-based method for conserved and divergent co-expression gene module identifica
Background: Comparative analysis of gene expression profiling of multiple biological categories, such as different species of organisms or different kinds of tissue, promises to e...
Wensheng Zhang, Andrea Edwards, Wei Fan, Dongxiao ...