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JCB
2006
129views more  JCB 2006»
15 years 2 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes
BMCBI
2005
118views more  BMCBI 2005»
15 years 2 months ago
Feature selection and classification for microarray data analysis: Evolutionary methods for identifying predictive genes
Background: In the clinical context, samples assayed by microarray are often classified by cell line or tumour type and it is of interest to discover a set of genes that can be us...
Thanyaluk Jirapech-Umpai, J. Stuart Aitken
BMCBI
2008
178views more  BMCBI 2008»
15 years 2 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
PAKDD
2007
ACM
152views Data Mining» more  PAKDD 2007»
15 years 8 months ago
Spectral Clustering Based Null Space Linear Discriminant Analysis (SNLDA)
While null space based linear discriminant analysis (NLDA) obtains a good discriminant performance, the ability easily suffers from an implicit assumption of Gaussian model with sa...
Wenxin Yang, Junping Zhang
BMCBI
2007
194views more  BMCBI 2007»
15 years 2 months ago
A meta-data based method for DNA microarray imputation
Background: DNA microarray experiments are conducted in logical sets, such as time course profiling after a treatment is applied to the samples, or comparisons of the samples unde...
Rebecka Jörnsten, Ming Ouyang, Hui-Yu Wang