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BMCBI
2006
108views more  BMCBI 2006»
13 years 7 months ago
Gene function classification using Bayesian models with hierarchy-based priors
We investigate the application of hierarchical classification schemes to the annotation of gene function based on several characteristics of protein sequences including phylogenic ...
Babak Shahbaba, Radford M. Neal
INFORMS
1998
142views more  INFORMS 1998»
13 years 7 months ago
Distributed State Space Generation of Discrete-State Stochastic Models
High-level formalisms such as stochastic Petri nets can be used to model complex systems. Analysis of logical and numerical properties of these models often requires the generatio...
Gianfranco Ciardo, Joshua Gluckman, David M. Nicol
BMCBI
2004
323views more  BMCBI 2004»
13 years 7 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
SIGIR
2008
ACM
13 years 7 months ago
A few examples go a long way: constructing query models from elaborate query formulations
We address a specific enterprise document search scenario, where the information need is expressed in an elaborate manner. In our scenario, information needs are expressed using a...
Krisztian Balog, Wouter Weerkamp, Maarten de Rijke
EVOW
2007
Springer
14 years 1 months ago
Modeling the Shoot Apical Meristem in A. thaliana : Parameter Estimation for Spatial Pattern Formation
Understanding the self-regulatory mechanisms controlling the spatial and temporal structure of multicellular organisms represents one of the major challenges in molecular biology. ...
Tim Hohm, Eckart Zitzler