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» Algorithms for Challenging Motif Problems
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IJKDB
2010
162views more  IJKDB 2010»
13 years 5 months ago
New Trends in Graph Mining: Structural and Node-Colored Network Motifs
Searching for repeated features characterizing biological data is fundamental in computational biology. When biological networks are under analysis, the presence of repeated modul...
Francesco Bruno, Luigi Palopoli, Simona E. Rombo
SDM
2007
SIAM
145views Data Mining» more  SDM 2007»
13 years 9 months ago
Finding Motifs in a Database of Shapes
The problem of efficiently finding images that are similar to a target image has attracted much attention in the image processing community and is rightly considered an informatio...
Xiaopeng Xi, Eamonn J. Keogh, Li Wei, Agenor Mafra...
ISAAC
2004
Springer
125views Algorithms» more  ISAAC 2004»
14 years 1 months ago
Local Gapped Subforest Alignment and Its Application in Finding RNA Structural Motifs
RNA molecules whose secondary structures contain similar substructures often have similar functions. Therefore, an important task in the study of RNA is to develop methods for disc...
Jesper Jansson, Ngo Trung Hieu, Wing-Kin Sung
JCB
2007
118views more  JCB 2007»
13 years 7 months ago
Discovering Topological Motifs Using a Compact Notation
Discovering topological motifs or common topologies in one or more graphs is an important as well as an interesting problem. It had been classically viewed as the subgraph isomorp...
Laxmi Parida
RECOMB
2006
Springer
14 years 8 months ago
A Study of Accessible Motifs and RNA Folding Complexity
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Zi...