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» Algorithms for Comparing Pedigree Graphs
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FSTTCS
2010
Springer
13 years 7 months ago
Finding Independent Sets in Unions of Perfect Graphs
ABSTRACT. The maximum independent set problem (MAXIS) on general graphs is known to be NPhard to approximate within a factor of n1-, for any > 0. However, there are many "...
Venkatesan T. Chakaravarthy, Vinayaka Pandit, Samb...
BMCBI
2010
189views more  BMCBI 2010»
13 years 9 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
JSAT
2008
122views more  JSAT 2008»
13 years 9 months ago
SAT Algorithms for Colouring Some Special Classes of Graphs: Some Theoretical and Experimental Results
The local search algorithm GSAT is based on the notion of Satisfiability. It has been used successfully for colouring graphs, solving instances of the 3SAT problem, planning block...
Sriyankar Acharyya
AIPS
2010
13 years 11 months ago
Action Elimination and Plan Neighborhood Graph Search: Two Algorithms for Plan Improvement
Compared to optimal planners, satisficing planners can solve much harder problems but may produce overly costly and long plans. Plan quality for satisficing planners has become in...
Hootan Nakhost, Martin Müller 0003
RECOMB
2007
Springer
14 years 9 months ago
Association Mapping of Complex Diseases with Ancestral Recombination Graphs: Models and Efficient Algorithms
Association, or LD (linkage disequilibrium), mapping is an intensely-studied approach to gene mapping (genome-wide or in candidate regions) that is widely hoped to be able to effic...
Yufeng Wu