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» Algorithms for Large, Sparse Network Alignment Problems
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RECOMB
2007
Springer
14 years 8 months ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
IJCV
2012
11 years 10 months ago
Sparse Occlusion Detection with Optical Flow
Abstract We tackle the problem of detecting occluded regions in a video stream. Under assumptions of Lambertian reflection and static illumination, the task can be posed as a vari...
Alper Ayvaci, Michalis Raptis, Stefano Soatto
KDD
2012
ACM
271views Data Mining» more  KDD 2012»
11 years 10 months ago
GigaTensor: scaling tensor analysis up by 100 times - algorithms and discoveries
Many data are modeled as tensors, or multi dimensional arrays. Examples include the predicates (subject, verb, object) in knowledge bases, hyperlinks and anchor texts in the Web g...
U. Kang, Evangelos E. Papalexakis, Abhay Harpale, ...
BMCBI
2010
101views more  BMCBI 2010»
13 years 7 months ago
Enrichment of homologs in insignificant BLAST hits by co-complex network alignment
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
Like Fokkens, Sandra M. C. Botelho, Jos Boekhorst,...
PAKDD
2005
ACM
161views Data Mining» more  PAKDD 2005»
14 years 1 months ago
Online Algorithms for Mining Inter-stream Associations from Large Sensor Networks
We study the problem of mining frequent value sets from a large sensor network. We discuss how sensor stream data could be represented that facilitates efficient online mining and ...
K. K. Loo, Ivy Tong, Ben Kao