-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, We...
The classic algorithm for optimal buffer insertion due to van Ginneken has time and space complexity O(n2 ), where n is the number of possible buffer positions. We present a new a...
Clustering, in data mining, is useful to discover distribution patterns in the underlying data. Clustering algorithms usually employ a distance metric based (e.g., euclidean) simi...
We propose a Parallel Banding Algorithm (PBA) on the GPU to compute the exact Euclidean Distance Transform (EDT) for a binary image in 2D and higher dimensions. Partitioning the i...
Thanh-Tung Cao, Ke Tang, Anis Mohamed, Tiow Seng T...
The mean-shift algorithm, based on ideas proposed by Fukunaga and Hostetler (1975), is a hill-climbing algorithm on the density defined by a finite mixture or a kernel density e...