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BMCBI
2008
128views more  BMCBI 2008»
13 years 9 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich
BMCBI
2007
108views more  BMCBI 2007»
13 years 9 months ago
Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants
Background: Single nucleotide polymorphisms (SNPs) and genes that exhibit presence/absence variation have provided informative marker sets for bacterial and viral genotyping. Iden...
Erin P. Price, John Inman-Bamber, Venugopal Thiruv...
SIGIR
2008
ACM
13 years 8 months ago
SpotSigs: robust and efficient near duplicate detection in large web collections
Motivated by our work with political scientists who need to manually analyze large Web archives of news sites, we present SpotSigs, a new algorithm for extracting and matching sig...
Martin Theobald, Jonathan Siddharth, Andreas Paepc...
SIGIR
2008
ACM
13 years 8 months ago
Named entity normalization in user generated content
Named entity recognition is important for semantically oriented retrieval tasks, such as question answering, entity retrieval, biomedical retrieval, trend detection, and event and...
Valentin Jijkoun, Mahboob Alam Khalid, Maarten Mar...
SIGIR
2008
ACM
13 years 8 months ago
On profiling blogs with representative entries
With an explosive growth of blogs, information seeking in blogosphere becomes more and more challenging. One example task is to find the most relevant topical blogs against a give...
Jinfeng Zhuang, Steven C. H. Hoi, Aixin Sun