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» Algorithms for phylogenetic footprinting
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SRDS
2003
IEEE
14 years 1 months ago
Autonomous Replication for High Availability in Unstructured P2P Systems
We consider the problem of increasing the availability of shared data in peer-to-peer (P2P) systems so that users can access any content, regardless of the current subset of onlin...
Francisco Matias Cuenca-Acuna, Richard P. Martin, ...
RECOMB
2004
Springer
14 years 8 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler
BMCBI
2005
113views more  BMCBI 2005»
13 years 8 months ago
PentaPlot: A software tool for the illustration of genome mosaicism
Background: Dekapentagonal maps depict the phylogenetic relationships of five genomes in a visually appealing diagram and can be viewed as an alternative to a single evolutionary ...
Lutz Hamel, Olga Zhaxybayeva, J. Peter Gogarten
WABI
2009
Springer
162views Bioinformatics» more  WABI 2009»
14 years 3 months ago
Aligning Biomolecular Networks Using Modular Graph Kernels
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
ICDE
2010
IEEE
188views Database» more  ICDE 2010»
14 years 8 months ago
Space-efficient Online Approximation of Time Series Data: Streams, Amnesia, and Out-of-order
In this paper, we present an abstract framework for online approximation of time-series data that yields a unified set of algorithms for several popular models: data streams, amnes...
Sorabh Gandhi, Luca Foschini, Subhash Suri