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» Algorithms for phylogenetic footprinting
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BIBM
2008
IEEE
106views Bioinformatics» more  BIBM 2008»
13 years 10 months ago
Uncovering Genomic Reassortments among Influenza Strains by Enumerating Maximal Bicliques
The evolutionary histories of viral genomes have received significant recent attention due to their importance in understanding virulence and the corresponding ramifications to pu...
Niranjan Nagarajan, Carl Kingsford
BIB
2008
106views more  BIB 2008»
13 years 8 months ago
Biodiversity informatics: the challenge of linking data and the role of shared identifiers
A major challenge facing biodiversity informatics is integrating data stored in widely distributed databases. Initial efforts have relied on taxonomic names as the shared identifi...
Roderic D. M. Page
BMCBI
2010
95views more  BMCBI 2010»
13 years 8 months ago
Heuristics for the inversion median problem
Background: The study of genome rearrangements has become a mainstay of phylogenetics and comparative genomics. Fundamental in such a study is the median problem: given three geno...
Vaibhav Rajan, Andrew Wei Xu, Yu Lin, Krister M. S...
BMCBI
2007
107views more  BMCBI 2007»
13 years 8 months ago
Progressive multiple sequence alignments from triplets
Motivation: The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step c...
Matthias Kruspe, Peter F. Stadler
CVPR
2009
IEEE
2115views Computer Vision» more  CVPR 2009»
15 years 3 months ago
Real-Time O(1) Bilateral Filtering
We propose a new bilateral filtering algorithm with computational complexity invariant to filter kernel size, socalled O(1) or constant time in the literature. By showing that a...
Kar-Han Tan, Narendra Ahuja, Qingxiong Yang