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BIOINFORMATICS
2010
13 years 2 months ago
2010
BIBE
2005
IEEE
14 years 1 months ago
2005
IEEE
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
JCB
2002
13 years 7 months ago
2002
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
RECOMB
2007
Springer
14 years 8 months ago
2007
Springer
Abstract. Sequence to structure alignment is an important step in homology modeling of protein structures. Incorporation of features like secondary structure, solvent accessibility...
CP
2003
Springer
14 years 26 days ago
2003
Springer
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...