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BMCBI
2006
113views more  BMCBI 2006»
15 years 3 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
BMCBI
2007
164views more  BMCBI 2007»
15 years 3 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
DPD
2007
86views more  DPD 2007»
15 years 3 months ago
Semantics based customization of UBL document schemas
Abstract. Universal Business Language (UBL) is an OASIS initiative to develop common business document schemas to provide document interoperability in the eBusiness domain. Since t...
Yalin Yarimagan, Asuman Dogac
CEC
2005
IEEE
15 years 9 months ago
Multiobjective clustering around medoids
Abstract- The large majority of existing clustering algorithms are centered around the notion of a feature, that is, individual data items are represented by their intrinsic proper...
Julia Handl, Joshua D. Knowles
BMCBI
2007
107views more  BMCBI 2007»
15 years 3 months ago
Linking microarray reporters with protein functions
Background: The analysis of microarray experiments requires accurate and up-to-date functional annotation of the microarray reporters to optimize the interpretation of the biologi...
Stan Gaj, Arie van Erk, Rachel I. M. van Haaften, ...