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BMCBI
2005
125views more  BMCBI 2005»
13 years 10 months ago
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
Amarendran R. Subramanian, Jan Weyer-Menkhoff, Mic...
BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
14 years 4 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
COLING
2008
13 years 11 months ago
Multilingual Alignments by Monolingual String Differences
We propose a method to obtain subsentential alignments from several languages simultaneously. The method handles several languages at once, and avoids the complexity explosion due...
Adrien Lardilleux, Yves Lepage
ICASSP
2011
IEEE
13 years 2 months ago
A unified approach to real time audio-to-score and audio-to-audio alignment using sequential Montecarlo inference techniques
We present a methodology for the real time alignment of music signals using sequential Montecarlo inference techniques. The alignment problem is formulated as the state tracking o...
Nicola Montecchio, Arshia Cont
TCBB
2008
95views more  TCBB 2008»
13 years 10 months ago
Solving the Problem of Trans-Genomic Query with Alignment Tables
Abstract-- The trans-genomic query (TGQ) problem -- enabling the free query of biological information, even across genomes -- is a central challenge facing bioinformatics. Solution...
Douglas Stott Parker Jr., Ruey-Lung Hsiao, Yi Xing...