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BMCBI
2007
179views more  BMCBI 2007»
13 years 10 months ago
Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data
Background: The wide use of Affymetrix microarray in broadened fields of biological research has made the probeset annotation an important issue. Standard Affymetrix probeset anno...
Hui Yu, Feng Wang, Kang Tu, Lu Xie, Yuan-Yuan Li, ...
BMCBI
2005
104views more  BMCBI 2005»
13 years 10 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
BMCBI
2008
80views more  BMCBI 2008»
13 years 10 months ago
Computational evaluation of TIS annotation for prokaryotic genomes
Background: Accurate annotation of translation initiation sites (TISs) is essential for understanding the translation initiation mechanism. However, the reliability of TIS annotat...
Gang-Qing Hu, Xiaobin Zheng, Li-Ning Ju, Huaiqiu Z...
SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
14 years 10 months ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han
USS
2008
14 years 10 days ago
Automatic Generation of XSS and SQL Injection Attacks with Goal-Directed Model Checking
Cross-site scripting (XSS) and SQL injection errors are two prominent examples of taint-based vulnerabilities that have been responsible for a large number of security breaches in...
Michael C. Martin, Monica S. Lam