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113
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RECOMB
2006
Springer
16 years 3 months ago
Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes
Micro-indels are small insertion or deletion events (indels) that occur during genome evolution. The study of micro-indels is important, both in order to better understand the unde...
Sagi Snir, Lior Pachter
RECOMB
2001
Springer
16 years 3 months ago
Algorithms for phylogenetic footprinting
Phylogenetic footprinting is a comparative genomics approach for predicting transcription factor binding sites, where a set of orthologous regulatory regions are compared and short...
Mathieu Blanchette
118
Voted
OTM
2009
Springer
15 years 10 months ago
Merging Sets of Taxonomically Organized Data Using Concept Mappings under Uncertainty
Abstract. We present a method for using aligned ontologies to merge taxonomically organized data sets that have apparently compatible schemas, but potentially different semantics f...
David Thau, Shawn Bowers, Bertram Ludäscher
120
Voted
SEMWEB
2009
Springer
15 years 10 months ago
MapPSO Results for OAEI 2009
Abstract. This paper presents and discusses the results of the latest developments of the MapPSO system, which is an ontology alignment approach that is based on discrete particle ...
Jürgen Bock, Peng Liu 0002, Jan Hettenhausen
135
Voted
ICASSP
2007
IEEE
15 years 9 months ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...