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BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
ChemAlign: Biologically Relevant Multiple Sequence Alignment Using Physicochemical Properties
—We present a new algorithm, ChemAlign, that uses physicochemical properties and secondary structure elements to create biologically relevant multiple sequence alignments (MSAs)....
Hyrum Carroll, Mark J. Clement, Quinn Snell, David...
EMNLP
2008
13 years 11 months ago
Improved Sentence Alignment on Parallel Web Pages Using a Stochastic Tree Alignment Model
Parallel web pages are important source of training data for statistical machine translation. In this paper, we present a new approach to sentence alignment on parallel web pages....
Lei Shi, Ming Zhou
BMCBI
2008
121views more  BMCBI 2008»
13 years 10 months ago
ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
Background: Detecting conserved noncoding sequences (CNSs) across species highlights the functional elements. Alignment procedures combined with computational prediction of transc...
Hisakazu Iwama, Yukio Hori, Kensuke Matsumoto, Koj...
BMCBI
2006
139views more  BMCBI 2006»
13 years 9 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana