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» Aligning alignments exactly
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FPL
2008
Springer
150views Hardware» more  FPL 2008»
14 years 15 days ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar
GCB
2001
Springer
111views Biometrics» more  GCB 2001»
14 years 3 months ago
Approximate Bayesian Discrimination between Alternative DNA Mosaic Structures
: We derive an approximate Bayesian hypothesis test to discriminate between alternative mosaic structures of DNA sequence alignments, and test the viability of this approach on a s...
Dirk Husmeier, Frank Wright
ACL
1998
14 years 9 days ago
Automatically Creating Bilingual Lexicons for Machine Translation from Bilingual Text
A method is presented for automatically augmenting the bilingual lexicon of an existing Machine Translation system, by extracting bilingual entries from aligned bilingual text. Th...
Davide Turcato
ICPR
2006
IEEE
15 years 1 days ago
Improving Face Recognition by Online Image Alignment
Face recognition accuracy is affected by many factors. This paper studies one of the factors, and provides a reliable image alignment for face recognition. For this purpose, a per...
Peng Wang, Lam Cam Tran, Qiang Ji
RECOMB
2006
Springer
14 years 11 months ago
Alignment Statistics for Long-Range Correlated Genomic Sequences
It is well known that the base composition along eukaryotic genomes is long-range correlated. Here, we investigate the effect of such long-range correlations on alignment score sta...
Philipp W. Messer, Ralf Bundschuh, Martin Vingron,...