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» Alignment of Polarized Sets
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SIGMOD
2010
ACM
231views Database» more  SIGMOD 2010»
15 years 9 months ago
Automatically incorporating new sources in keyword search-based data integration
Scientific data offers some of the most interesting challenges in data integration today. Scientific fields evolve rapidly and accumulate masses of observational and experiment...
Partha Pratim Talukdar, Zachary G. Ives, Fernando ...
BMCBI
2008
158views more  BMCBI 2008»
15 years 4 months ago
LC-MSsim - a simulation software for liquid chromatography mass spectrometry data
Background: Mass Spectrometry coupled to Liquid Chromatography (LC-MS) is commonly used to analyze the protein content of biological samples in large scale studies. The data resul...
Ole Schulz-Trieglaff, Nico Pfeifer, Clemens Gr&oum...
BMCBI
2008
145views more  BMCBI 2008»
15 years 4 months ago
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction
Background: Amino acids responsible for structure, core function or specificity may be inferred from multiple protein sequence alignments where a limited set of residue types are ...
Jonathan R. Manning, Emily R. Jefferson, Geoffrey ...
BMCBI
2007
148views more  BMCBI 2007»
15 years 4 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
NAR
2008
125views more  NAR 2008»
15 years 4 months ago
Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Phylogenetic analyses are central to many research areas in biology and typically involve the identification of homologous sequences, their multiple alignment, the phylogenetic re...
Alexis Dereeper, V. Guignon, G. Blanc, Stép...