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EMNLP
2007
15 years 5 months ago
Syntactic Re-Alignment Models for Machine Translation
We present a method for improving word alignment for statistical syntax-based machine translation that employs a syntactically informed alignment model closer to the translation m...
Jonathan May, Kevin Knight
BIBM
2008
IEEE
112views Bioinformatics» more  BIBM 2008»
15 years 11 months ago
Fast Alignments of Metabolic Networks
Network alignments are extensively used for comparing, exploring, and predicting biological networks. Existing alignment tools are mostly based on isomorphic and homeomorphic embe...
Qiong Cheng, Piotr Berman, Robert W. Harrison, Ale...
ICASSP
2007
IEEE
15 years 10 months ago
Protein Fold Recognition using Residue-Based Alignments of Sequence and Secondary Structure
Protein structure prediction aims to determine the three-dimensional structure of proteins form their amino acid sequences. When a protein does not have similarity (homology) to a...
Zafer Aydin, Hakan Erdogan, Yucel Altunbasak
RECOMB
2010
Springer
15 years 9 months ago
SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings
Abstract. We consider the problem of aligning two metabolic pathways. Unlike traditional approaches, we do not restrict the alignment to one-to-one mappings between the molecules o...
Ferhat Ay, Tamer Kahveci
BMCBI
2007
142views more  BMCBI 2007»
15 years 4 months ago
SABERTOOTH: protein structural alignment based on a vectorial structure representation
Background: The task of computing highly accurate structural alignments of proteins in very short computation time is still challenging. This is partly due to the complexity of pr...
Florian Teichert, Ugo Bastolla, Markus Porto