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» Alignment of Polarized Sets
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DAM
2007
177views more  DAM 2007»
15 years 4 months ago
On Khachiyan's algorithm for the computation of minimum-volume enclosing ellipsoids
Given A := {a1, . . . , am} ⊂ Rd whose affine hull is Rd, we study the problems of computing an approximate rounding of the convex hull of A and an approximation to the minimum ...
Michael J. Todd, E. Alper Yildirim
BMCBI
2007
105views more  BMCBI 2007»
15 years 4 months ago
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences
Background: The secondary structure of an RNA must be known before the relationship between its structure and function can be determined. One way to predict the secondary structur...
Stefan Engelen, Fariza Tahi
166
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CGF
2006
191views more  CGF 2006»
15 years 4 months ago
A Robust Two-Step Procedure for Quad-Dominant Remeshing
We propose a new technique for quad-dominant remeshing which separates the local regularity requirements from the global alignment requirements by working in two steps. In the fir...
Martin Marinov, Leif Kobbelt
140
Voted
BMCBI
2005
100views more  BMCBI 2005»
15 years 4 months ago
EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Jean-Christophe Gelly, Laurent Chiche, Jér&...
BMCBI
2008
109views more  BMCBI 2008»
15 years 4 months ago
Merging microsatellite data: enhanced methodology and software to combine genotype data for linkage and association analysis
Background: Correctly merged data sets that have been independently genotyped can increase statistical power in linkage and association studies. However, alleles from microsatelli...
Angela P. Presson, Eric M. Sobel, Paivi Pajukanta,...