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» Alignments of RNA Structures
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SAC
2009
ACM
14 years 2 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
A cross-species alignment tool (CAT)
Background: The main two sorts of automatic gene annotation frameworks are ab initio and alignment-based, the latter splitting into two sub-groups. The first group is used for int...
Heng Li, Liang Guan, Tao Liu, Yiran Guo, Wei-Mou Z...
WABI
2009
Springer
200views Bioinformatics» more  WABI 2009»
14 years 2 months ago
K-Partite RNA Secondary Structures
Minghui Jiang, Pedro J. Tejada, Ramoni O. Lasisi, ...
ESCAPE
2007
Springer
251views Algorithms» more  ESCAPE 2007»
14 years 1 months ago
Extending the Hardness of RNA Secondary Structure Comparison
Guillaume Blin, Guillaume Fertin, Irena Rusu, Chri...
WABI
2007
Springer
14 years 1 months ago
HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding
Hosna Jabbari, Anne Condon, Ana Pop, Cristina Pop,...