Extracting tree transducer rules for syntactic MT systems can be hindered by word alignment errors that violate syntactic correspondences. We propose a novel model for unsupervise...
Word alignment methods can gain valuable guidance by ensuring that their alignments maintain cohesion with respect to the phrases specified by a monolingual dependency tree. Howev...
We present an extension of the standard partition function approach to RNA secondary structures that computes the probabilities Pu[i, j] that a sequence interval [i, j] is unpaired...
Transterm facilitates studies of messenger RNAs and translational control signals. Each messenger RNA (mRNA) from GenBank is extracted and broken into its functional components, i...
Grant H. Jacobs, Peter A. Stockwell, Mark J. Schre...
Background: We introduce GASH, a new, publicly accessible program for structural alignment and superposition. Alignments are scored by the Number of Equivalent Residues (NER), a q...