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BIBE
2007
IEEE
152views Bioinformatics» more  BIBE 2007»
13 years 8 months ago
SBLAST: Structural Basic Local Alignment Searching Tools using Geometric Hashing
While much research has been done on finding similarities between protein sequences, there has not been the same progress on finding similarities between protein structures. Here ...
Tom Milledge, Gaolin Zheng, Tim Mullins, Giri Nara...
JCDL
2010
ACM
154views Education» more  JCDL 2010»
14 years 1 months ago
Transferring structural markup across translations using multilingual alignment and projection
We present here a method for automatically projecting structural information across translations, including canonical citation structure (such as chapters and sections), speaker i...
David Bamman, Alison Babeu, Gregory Crane
BMCBI
2008
114views more  BMCBI 2008»
13 years 8 months ago
Indel PDB: A database of structural insertions and deletions derived from sequence alignments of closely related proteins
Background: Insertions and deletions (indels) represent a common type of sequence variations, which are less studied and pose many important biological questions. Recent research ...
Michael Hsing, Artem Cherkasov
ISBI
2006
IEEE
14 years 8 months ago
Nonuniform temporal alignment of slice sequences for four-dimensional imaging of cyclically deforming embryonic structures
The temporal alignment of nongated slice-sequences acquired at different axial positions in the living embryonic zebrafish heart permits the reconstruction of dynamic, three-dimen...
Michael Liebling, Julien Vermot, Arian S. Forouhar...
EPIA
2009
Springer
14 years 2 months ago
Phrase Translation Extraction from Aligned Parallel Corpora Using Suffix Arrays and Related Structures
In this paper, we will address term translation extraction from indexed aligned parallel corpora, by using a couple of association measures combined by a voting scheme, for scaling...
José Aires, Gabriel Pereira Lopes, Luis Gom...