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» Alignments of RNA Structures
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BMCBI
2006
161views more  BMCBI 2006»
13 years 7 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang
AO
2011
112views more  AO 2011»
13 years 2 months ago
The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data
Biomedical Ontologies are intended to integrate diverse biomedical data to enable intelligent datamining and facilitate translation of basic research into useful clinical knowledg...
Robert Hoehndorf, Colin R. Batchelor, Thomas Bittn...
CPM
2006
Springer
145views Combinatorics» more  CPM 2006»
13 years 11 months ago
Approximation of RNA Multiple Structural Alignment
Abstract. In the context of non-coding RNA (ncRNA) multiple structural alignment, Davydov and Batzoglou introduced in [7] the problem of finding the largest nested linear graph tha...
Marcin Kubica, Romeo Rizzi, Stéphane Vialet...
METMBS
2004
196views Mathematics» more  METMBS 2004»
13 years 9 months ago
An Open Problem in RNA Secondary Structure Prediction by the Comparative Approach
Abstract One approach to predict the secondary structure of RNA is the comparative approach. This approach is used when alignment of several homologous sequences of a RNA is availa...
Stefan Engelen, Fariza Tahi
IPPS
2007
IEEE
14 years 1 months ago
RNAVLab: A unified environment for computational RNA structure analysis based on grid computing technology
Ribonucleic acid (RNA) molecules play important roles in many biological processes including gene expression and regulation. An RNA molecule is a linear polymer which folds back o...
Michela Taufer, Ming-Ying Leung, Kyle L. Johnson, ...