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BMCBI
2007
265views more  BMCBI 2007»
13 years 10 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
CGF
2010
204views more  CGF 2010»
13 years 10 months ago
Automatic Animation for Time-Varying Data Visualization
This paper presents a digital storytelling approach that generates automatic animations for time-varying data visualization. Our approach simulates the composition and transition ...
Li Yu, Aidong Lu, William Ribarsky, Wei Chen
IMC
2003
ACM
14 years 3 months ago
Tomography-based overlay network monitoring
Overlay network monitoring enables distributed Internet applications to detect and recover from path outages and periods of degraded performance within seconds. For an overlay net...
Yan Chen, David Bindel, Randy H. Katz
SC
2009
ACM
14 years 2 months ago
GPU based sparse grid technique for solving multidimensional options pricing PDEs
It has been shown that the sparse grid combination technique can be a practical tool to solve high dimensional PDEs arising in multidimensional option pricing problems in finance...
Abhijeet Gaikwad, Ioane Muni Toke
BMCBI
2004
177views more  BMCBI 2004»
13 years 9 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu