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BMCBI
2006
102views more  BMCBI 2006»
13 years 7 months ago
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
Background: The accuracy of protein secondary structure prediction has been improving steadily towards the 88% estimated theoretical limit. There are two types of prediction algor...
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
WCC
2005
Springer
130views Cryptology» more  WCC 2005»
14 years 29 days ago
On the Design of Codes for DNA Computing
In this paper, we describe a broad class of problems arising in the context of designing codes for DNA computing. We primarily focus on design considerations pertaining to the phen...
Olgica Milenkovic, Navin Kashyap
BMCBI
2007
175views more  BMCBI 2007»
13 years 7 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
TCAD
2002
110views more  TCAD 2002»
13 years 7 months ago
A constructive genetic algorithm for gate matrix layout problems
This paper describes an application of a Constructive Genetic Algorithm (CGA) to the Gate Matrix Layout Problem (GMLP). The GMLP happens in very large scale integration (VLSI) desi...
Alexandre César Muniz de Oliveira, Luiz Ant...
GECCO
2005
Springer
132views Optimization» more  GECCO 2005»
14 years 1 months ago
Evolutionary testing of state-based programs
The application of Evolutionary Algorithms to structural test data generation, known as Evolutionary Testing, has to date largely focused on programs with input-output behavior. H...
Phil McMinn, Mike Holcombe