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BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...
RECOMB
2010
Springer
13 years 5 months ago
Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps
Chaining fragments is a crucial step in genome alignment. Existing chaining algorithms compute a maximum weighted chain with no overlaps allowed between adjacent fragments. In prac...
Raluca Uricaru, Alban Mancheron, Eric Rivals
ECCV
2000
Springer
14 years 9 months ago
Reconstruction from Uncalibrated Sequences with a Hierarchy of Trifocal Tensors
This paper considers projective reconstruction with a hierarchical computational structure of trifocal tensors that integrates feature tracking and geometrical validation of the f...
David Nistér
ICASSP
2008
IEEE
14 years 1 months ago
Deformable trellis: open contour tracking in bio-image sequences
This paper presents an open contour tracking method that employs an arc-emission Hidden Markov Model (HMM). The algorithm encodes the shape information of the structure in a spati...
Mehmet Emre Sargin, Alphan Altinok, Kenneth Rose, ...
GECCO
2011
Springer
240views Optimization» more  GECCO 2011»
12 years 11 months ago
Collisions are helpful for computing unique input-output sequences
Computing unique input-output sequences (UIOs) from finite state machines (FSMs) is important for conformance testing in software engineering, where evolutionary algorithms (EAs)...
Chao Qian, Yang Yu, Zhi-Hua Zhou