The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
Due to their expressive power, Regular Expressions (REs) are quickly becoming an integral part of language specifications for several important application scenarios. Many of thes...
Chee Yong Chan, Minos N. Garofalakis, Rajeev Rasto...
Correctly generating a structured query (e.g., an XQuery or a SQL query) requires the user to have a full understanding of the database schema, which can be a daunting task. Alter...
Several recent papers have focused on OLAP over imprecise data, where each fact can be a region, instead of a point, in a multidimensional space. They have provided a multiple-wor...
Douglas Burdick, AnHai Doan, Raghu Ramakrishnan, S...