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RECOMB
2005
Springer
14 years 9 months ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao
WSCG
2004
148views more  WSCG 2004»
13 years 10 months ago
Visualization of Dynamic Behaviour of Multi-Agent Systems
The extension of our research on analysis of a single agent or agent communities combining advanced methods of visualization with traditional AI techniques is presented in this pa...
David Rehor, Pavel Slavík, David Kadlecek, ...
POPL
2008
ACM
14 years 9 months ago
Imperative self-adjusting computation
Self-adjusting computation enables writing programs that can automatically and efficiently respond to changes to their data (e.g., inputs). The idea behind the approach is to stor...
Umut A. Acar, Amal Ahmed, Matthias Blume
DATE
2009
IEEE
159views Hardware» more  DATE 2009»
14 years 3 months ago
Design and implementation of a database filter for BLAST acceleration
— BLAST is a very popular Computational Biology algorithm. Since it is computationally expensive it is a natural target for acceleration research, and many reconfigurable archite...
Panagiotis Afratis, Constantinos Galanakis, Euripi...
PLDI
2006
ACM
14 years 2 months ago
Automatic instruction scheduler retargeting by reverse-engineering
In order to generate high-quality code for modern processors, a compiler must aggressively schedule instructions, maximizing resource utilization for execution efficiency. For a ...
Matthew J. Bridges, Neil Vachharajani, Guilherme O...