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AAAI
2006
13 years 9 months ago
Conflict Resolution and a Framework for Collaborative Interactive Evolution
Interactive evolutionary computation (IEC) has proven useful in a variety of applications by combining the subjective evaluation of a user with the massive parallel search power o...
Sean R. Szumlanski, Annie S. Wu, Charles E. Hughes
IPPS
2002
IEEE
14 years 21 days ago
Parallel Genehunter: Implementation of a Linkage Analysis Package for Distributed-Memory Architectures
We present a parallel algorithm for performing multipoint linkage analysis of genetic marker data on large family pedigrees. The algorithm effectively distributes both the computa...
Gavin C. Conant, Steve Plimpton, William Old, Andr...
DATE
2004
IEEE
122views Hardware» more  DATE 2004»
13 years 11 months ago
Phase Coupled Code Generation for DSPs Using a Genetic Algorithm
The growing use of digital signal processors (DSPs) in embedded systems necessitates the use of optimizing compilers supporting special hardware features. Due to the irregular arc...
Markus Lorenz, Peter Marwedel
PODC
2004
ACM
14 years 1 months ago
Compact routing on euclidian metrics
We consider the problem of designing a compact communication network that supports efficient routing in an Euclidean plane. Our network design and routing scheme achieves 1+ stret...
Ittai Abraham, Dahlia Malkhi
BMCBI
2010
189views more  BMCBI 2010»
13 years 7 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...