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BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
TaxMan: a taxonomic database manager
Background: Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic ...
Martin Jones, Mark Blaxter
ICPADS
2006
IEEE
14 years 1 months ago
SPM Conscious Loop Scheduling for Embedded Chip Multiprocessors
One of the major factors that can potentially slow down widespread use of embedded chip multiprocessors is lack of efficient software support. In particular, automated code paral...
Liping Xue, Mahmut T. Kandemir, Guangyu Chen, Tayl...
BMCBI
2008
85views more  BMCBI 2008»
13 years 7 months ago
Normalizing biomedical terms by minimizing ambiguity and variability
Background: One of the difficulties in mapping biomedical named entities, e.g. genes, proteins, chemicals and diseases, to their concept identifiers stems from the potential varia...
Yoshimasa Tsuruoka, John McNaught, Sophia Ananiado...
BMCBI
2007
167views more  BMCBI 2007»
13 years 7 months ago
Applying negative rule mining to improve genome annotation
Background: Unsupervised annotation of proteins by software pipelines suffers from very high error rates. Spurious functional assignments are usually caused by unwarranted homolog...
Irena I. Artamonova, Goar Frishman, Dmitrij Frishm...
VMCAI
2010
Springer
14 years 4 months ago
Building a Calculus of Data Structures
Abstract. Techniques such as verification condition generation, preditraction, and expressive type systems reduce software verification to proving formulas in expressive logics. Pr...
Viktor Kuncak, Ruzica Piskac, Philippe Suter, Thom...