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    » An Evidence Ontology for Use in Pathway Genome Databases
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    SDM
    2004
    SIAM
    211views Data Mining» more  SDM 2004»
    Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
    13 years 10 months ago
    Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
    Download  www.dbs.informatik.uni-muenchen.de
    Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
    Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...
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    APBC
    2004
    122views Bioinformatics» more  APBC 2004»
    Integrating Biopathway Databases for Large-scale Modeling and Simulation
    13 years 10 months ago
    Integrating Biopathway Databases for Large-scale Modeling and Simulation
    Download  www.csml.org
    Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
    Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
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    ISMB
    2007
    206views Computational Biology» more  ISMB 2007»
    A Chado case study: an ontology-based modular schema for representing genome-associated biological information
    13 years 11 months ago
    A Chado case study: an ontology-based modular schema for representing genome-associated biological information
    Download  gmod.org
    Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
    Chris Mungall, David B. Emmert
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    BMCBI
    2005
    114views more  BMCBI 2005»
    AutoFACT: An Automatic Functional Annotation and Classification Tool
    13 years 8 months ago
    AutoFACT: An Automatic Functional Annotation and Classification Tool
    Download  www.biomedcentral.com
    Background: Assignment of function to new molecular sequence data is an essential step in genomics projects. The usual process involves similarity searches of a given sequence aga...
    Liisa B. Koski, Michael W. Gray, B. Franz Lang, Ge...
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    CORR
    2010
    Springer
    47views Education» more  CORR 2010»
    Ontology Usage at ZFIN
    13 years 6 months ago
    Ontology Usage at ZFIN
    Download  sunsite.informatik.rwth-aachen.de
    The Zebrafish Model Organism Database (ZFIN) provides a Web resource of zebrafish genomic, genetic, developmental, and phenotypic data. Four different ontologies are currently used...
    Doug Howe, Christian Pich
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