APBC 2004 - PDF Preprint Papers

APBC 2004

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APBC
2004

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RNA Secondary Structure Prediction with Simple Pseudoknots

14 years 25 days ago

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Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...

Jitender S. Deogun, Ruben Donts, Olga Komina, Fang...

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Id	Views	Title	Status

1	173	RNA Secondary Structure Prediction with Simple Pseudoknots	claim
2	166	THEMATICS is Effective for Active Site Prediction in Comparative Model Structures	claim
3	166	A Novel Method for Protein Subcellular Localization Based on Boosting and Probabilistic Neural Network.	claim
4	164	Cluster Ensemble and Its Applications in Gene Expression Analysis	claim
5	163	A Combined Model and a Varied Gibbs Sampling Algorithm Used for Motif Discovery	claim
6	154	Dispensation Order Generation for Pyrosequencing	claim
7	141	Molecular Imaging and Biomedical Process Modeling	claim
8	138	Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data	claim
9	132	Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques	claim
10	132	Multiple Sequence Alignment Using Tabu Search	claim
11	132	A Novel Feature Selection Method to Improve Classification of Gene Expression Data	claim
12	126	Informative 3D Visualization of Multiple Protein Structures	claim
13	125	A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction	claim
14	124	BRINet: A BioResource Integration Network	claim
15	123	Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction	claim
16	122	Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type 1	claim
17	122	Integrating Biopathway Databases for Large-scale Modeling and Simulation	claim
18	121	Using Emerging Pattern Based Projected Clustering and Gene Expression Data for Cancer Detection	claim
19	117	Detecting Local Symmetry Axis in 3-dimensional Virus Structures	claim
20	116	Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors	claim
21	116	Evolving Genetic Regulatory Networks Using an Artificial Genome	claim
22	108	Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences	claim
23	107	An Empirical Bayes Adjustment to Multiple p-values for the Detection of Differentially Expressed Genes in Microarray Experiments	claim
24	105	Phylogenetic Trees: An Information Visualisation Perspective	claim
25	97	EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment	claim
26	93	Representing Experimental Biological Data in Metabolic Networks	claim
27	90	A Rapid Method of Whole Genome Visualisation Illustrating Features in Both Coding and Non-coding Regions	claim
28	86	Recognition Sequences in the Restriction Endonucleases	claim
29	84	Mega Weaver: A Simple Iterative Approach for BAC Consensus Assembly	claim
30	84	PathwayFinder: Paving the Way Towards Automatic Pathway Extraction	claim
31	74	Classification Comparison of Prediction of Solvent Accessibility From Protein Sequences	claim
32	70	Variable-length Intervals in Homology Search	claim
33	64	Filtering of Ineffective siRNAs and Improved siRNA Design Tool	claim

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