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» An Expressive Extension of TLC
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BMCBI
2008
121views more  BMCBI 2008»
13 years 11 months ago
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments
Background: High-throughput methods that allow for measuring the expression of thousands of genes or proteins simultaneously have opened new avenues for studying biochemical proce...
Andreas Keller, Christina Backes, Maher Al-Awadhi,...
BMCBI
2006
147views more  BMCBI 2006»
13 years 11 months ago
A hidden Markov model approach for determining expression from genomic tiling micro arrays
Background: Genomic tiling micro arrays have great potential for identifying previously undiscovered coding as well as non-coding transcription. To-date, however, analyses of thes...
Kasper Munch, Paul P. Gardner, Peter Arctander, An...
BMCBI
2007
185views more  BMCBI 2007»
13 years 11 months ago
GEDI: a user-friendly toolbox for analysis of large-scale gene expression data
Background: Several mathematical and statistical methods have been proposed in the last few years to analyze microarray data. Most of those methods involve complicated formulas, a...
André Fujita, João Ricardo Sato, Car...
DBPL
1999
Springer
109views Database» more  DBPL 1999»
14 years 3 months ago
Expressing Topological Connectivity of Spatial Databases
We consider two-dimensional spatial databases defined in terms of polynomial inequalities and focus on the potential of programming languages for such databases to express queries...
Floris Geerts, Bart Kuijpers
BMCBI
2008
163views more  BMCBI 2008»
13 years 11 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig