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RECOMB
2004
Springer
14 years 8 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
BMCBI
2010
183views more  BMCBI 2010»
13 years 8 months ago
SING: Subgraph search In Non-homogeneous Graphs
Background: Finding the subgraphs of a graph database that are isomorphic to a given query graph has practical applications in several fields, from cheminformatics to image unders...
Raffaele Di Natale, Alfredo Ferro, Rosalba Giugno,...
IPPS
2000
IEEE
14 years 7 days ago
A General Parallel Simulated Annealing Library and its Application in Airline Industry
To solve real-world discrete optimization problems approximately metaheuristics such as simulated annealing and other local search methods are commonly used. For large instances o...
Georg Kliewer, Stefan Tschöke
IJCAI
2001
13 years 9 months ago
Backtracking Through Biconnected Components of a Constraint Graph
The algorithm presented here, BCC, is an enhancement of the well known Backtrack used to solve constraint satisfaction problems. Though most backtrack improvements rely on propaga...
Jean-François Baget, Yannic S. Tognetti
ATAL
2008
Springer
13 years 10 months ago
On k-optimal distributed constraint optimization algorithms: new bounds and algorithms
Distributed constraint optimization (DCOP) is a promising approach to coordination, scheduling and task allocation in multi agent networks. In large-scale or low-bandwidth network...
Emma Bowring, Jonathan P. Pearce, Christopher Port...