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» An algorithmic framework for network reconstruction
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BMCBI
2008
146views more  BMCBI 2008»
13 years 7 months ago
Rank-based edge reconstruction for scale-free genetic regulatory networks
Background: The reconstruction of genetic regulatory networks from microarray gene expression data has been a challenging task in bioinformatics. Various approaches to this proble...
Guanrao Chen, Peter Larsen, Eyad Almasri, Yang Dai
ICIP
2007
IEEE
14 years 9 months ago
Genetic Algorithms for Gielis Surface Recovery from 3D Data Sets
In this paper, we apply genetic algorithms to reconstruct Gielis surfaces from 3D data sets. The Levenberg-Marquardt method has been used as a standard for superquadrics recovery ...
Frédéric Truchetet, Sebti Foufou, Yo...
CISS
2008
IEEE
14 years 2 months ago
Reconstruction of compressively sensed images via neurally plausible local competitive algorithms
Abstract—We develop neurally plausible local competitive algorithms (LCAs) for reconstructing compressively sensed images. Reconstruction requires solving a sparse approximation ...
Robert L. Ortman, Christopher J. Rozell, Don H. Jo...
BMCBI
2007
129views more  BMCBI 2007»
13 years 7 months ago
Integrated network reconstruction, visualization and analysis using YANAsquare
Background: Modeling of metabolic networks includes tasks such as network assembly, network overview, calculation of metabolic fluxes and testing the robustness of the network. Re...
Roland Schwarz, Chunguang Liang, Christoph Kaleta,...
BIRD
2008
Springer
158views Bioinformatics» more  BIRD 2008»
13 years 9 months ago
A Computational Method for Reconstructing Gapless Metabolic Networks
Abstract. We propose a computational method for reconstructing metabolic networks. The method utilizes optimization techniques and graph traversal algorithms to discover a set of b...
Esa Pitkänen, Ari Rantanen, Juho Rousu, Esko ...